Package: genepop 1.2.2

genepop: Population Genetic Data Analysis Using Genepop

Makes the Genepop software available in R. This software implements a mixture of traditional population genetic methods and some more focused developments: it computes exact tests for Hardy-Weinberg equilibrium, for population differentiation and for genotypic disequilibrium among pairs of loci; it computes estimates of F-statistics, null allele frequencies, allele size-based statistics for microsatellites, etc.; and it performs analyses of isolation by distance from pairwise comparisons of individuals or population samples.

Authors:François Rousset [aut, cre, cph], Jimmy Lopez [ctb], Alexandre Genin [ctb], Khalid Belkhir [ctb]

genepop_1.2.2.tar.gz
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genepop.pdf |genepop.html✨
genepop/json (API)
NEWS

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

33 exports 1 stars 5.97 score 10 dependencies 92 mentions 51 scripts 500 downloads

Last updated 2 years agofrom:d970883044. Checks:OK: 1 NOTE: 8. Indexed: yes.

Exports:.check_bootstrap_args.check_gp_file_name.getDocDate.GIsolationByDistanceBetweenGroups.GIsolationByDistanceBetweenIndividuals.remove_temp_files.returnInfo.summary_GP_NULbasic_infoclean_workdirconversiondiploidizeFstgenedivFisgenepopExamplegetVersionGUIHWtable_analysisibdNm_privatenullspop_to_indivrelabel_allelessample_haploidset_restrictionsetMantelSeedsetRandomSeedstrucsummary.GP_outfiletest_difftest_HWtest_LDwrite_LD_tables

Dependencies:cligluelifecyclemagrittrRcppRcppProgressrlangstringistringrvctrs